Automated DNA Motif Discovery

Created by W.Langdon from gp-bibliography.bib Revision:1.4524

  author =       "W. B. Langdon and Olivia {Sanchez Graillet} and 
                 A. P. Harrison",
  title =        "Automated {DNA} Motif Discovery",
  howpublished = "arXiv",
  year =         "2010",
  month =        "30 " # jan,
  keywords =     "genetic algorithms, genetic programming,
                 Bioinformatics, motif, regular expression, strongly
                 typed genetic programming, context-free grammar,
                 pseudogene, short and microRNAs, non-coding
                 transcripts, systems biology, machine learning,
                 Bioinformatics, motif, regular expression",
  URL =          "",
  size =         "12 pages",
  abstract =     "Ensembl's human non-coding and protein coding genes
                 are used to automatically find DNA pattern motifs. The
                 Backus-Naur form (BNF) grammar for regular expressions
                 (RE) is used by genetic programming to ensure the
                 generated strings are legal. The evolved motif suggests
                 the presence of Thymine followed by one or more
                 Adenines etc. early in transcripts indicate a
                 non-protein coding gene.",

Genetic Programming entries for William B Langdon Olivia Sanchez Graillet Andrew P Harrison