A combination of kernel methods and genetic programming for gene expression pattern classification

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  author =       "Cuong To and Jiri Vohradsky",
  title =        "A combination of kernel methods and genetic
                 programming for gene expression pattern
  booktitle =    "Research, Innovation and Vision for the Future, 2006
                 International Conference on",
  year =         "2006",
  editor =       "Patrick Bellot and Vu Duong and Marc Bui",
  pages =        "214--221",
  address =      "Ho Chi Minh City, Vietnam",
  month =        feb # " 12-16",
  publisher =    "IEEE",
  keywords =     "genetic algorithms, genetic programming, Database
                 searching, Pattern classification, Pattern
  ISBN =         "1-4244-0316-2",
  DOI =          "doi:10.1109/RIVF.2006.1696440",
  size =         "8 pages",
  abstract =     "The rapidly emerging field of quantitative proteomics
                 has established itself as a credible approach for
                 understanding of the biology of whole organisms.
                 Classification of proteins according to the level of
                 their expression during a particular process allows
                 discovering causal relationships among genes and
                 proteins involved in the process. In this paper, we
                 would like to propose a new algorithm for pattern
                 classification, allowing for extraction of user defined
                 patterns from a database of kinetic gene expression
                 profiles. This algorithm is a combination of kernel
                 methods and genetic programming. The algorithm was
                 tested on publicly available transcriptomic and
                 proteomic time series datasets and the results showed
                 that the algorithm could find all similar patterns in
                 the database with very low misclassification rate.",
  notes =        "The database is available at
                 http://proteom.biomed.cas.cz The database is available
                 at http://genomewww.stanford.edu/serum/clusters.html",
  bibdate =      "2009-02-26",
  bibsource =    "DBLP,

Genetic Programming entries for Cuong Chieu To Jiri Vohradsky