Distilling GeneChips with Genetic Programming on the Emerald GPU supercomputer

Created by W.Langdon from gp-bibliography.bib Revision:1.4524

  author =       "W. B. Langdon",
  title =        "Distilling {GeneChips} with Genetic Programming on the
                 Emerald GPU supercomputer",
  journal =      "SIGEVOlution newsletter of the ACM Special Interest
                 Group on Genetic and Evolutionary Computation",
  year =         "2012",
  volume =       "6",
  number =       "1",
  pages =        "15--21",
  month =        "25 " # jul,
  keywords =     "genetic algorithms, genetic programming, parallel
                 computing, evolutionary computation, deme non-panmictic
                 GP, GPU, Bioinformatics, data mining, tumor biopsy,
                 Affymetrix HG-U133A and HG-U133B, GSE3494, unix, NFS,
                 Load Sharing Facility (LSF) LSB, Fermi Tesla,
                 InfiniBand, fat-tree network.",
  URL =          "http://www.sigevolution.org/issues/pdf/SIGEVOlution0601.pdf",
  DOI =          "doi:10.1145/2384697.2384699",
  size =         "7 pages",
  abstract =     "The Emerald supercomputer contains 1008 x86 CPU cores
                 and 372 nVidia M2090 Tesla. A CUDA GPGPU genetic
                 programming GeneChip datamining application which
                 searches for non-linear gene expression based
                 prediction of long term survival following breast
                 cancer surgery was transferred without change and run
                 on part of the Emerald cluster. An average of 33 giga
                 GPopS was achieved.",
  notes =        "Extends \cite{Langdon:2012:emerald}. Slides

Genetic Programming entries for William B Langdon